Difference between revisions of "TSS:Mm 101793.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_172524 | + | |all_trans=NM_172524:39 AK035561:39 BC139819:48 AK035736:63 ENSMUST00000020679.2:-101 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172524 | |nearest_refseq=NM_172524 | ||
|nearest_unigene=Mm.225253 | |nearest_unigene=Mm.225253 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=46166397 | |start=46166397 | ||
|start_of_center_position=46166402 | |start_of_center_position=46166402 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_172524 | + | |transcript_name=NM_172524 AK035561 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101793.1 | |tss_id=mm_101793.1 | ||
Revision as of 16:48, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46166402 |
|---|---|
| End of the center position in the TSS region: | 46166403 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_172524 AK035561 |
|---|---|
| Distance: | 39 |
| Num_trans: | 5 |
| All_trans: | NM_172524:39 AK035561:39 BC139819:48 AK035736:63 ENSMUST00000020679.2:-101 |
TATA-Box annotation
| Distance to TSS: | -43 |
|---|---|
| Nearest PromoterID: | NM_172524 |
| Entrez ID: | 214112 |
| Nearest Unigene: | Mm.225253 |
| Nearest Refseq: | NM_172524 |
| Nearest Ensembl: | ENSMUSG00000020411 |
| Gene Name: | NIPA-like domain containing 4 |
| Gene Alias: | 9530066K23Rik |
| Gene Description: | NIPA-like domain containing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
