Difference between revisions of "TSS:Mm 123918.1"
From referenceTSS
| Line 5: | Line 5: | ||
|D14Sel6= | |D14Sel6= | ||
|E25BMM= | |E25BMM= | ||
| − | |all_trans=AK002796:0 AK218926:76 AK205709:76 AK217202:76 AK209176:76 AK205546:76 AK215843:76 AK192783:76 | + | |all_trans=AK002796:0 LF241975:30 MA477552:30 AK218926:76 AK205709:76 AK217202:76 AK209176:76 AK205546:76 AK215843:76 AK192783:76 LF241974:102 MA477551:102 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22156 |
|end=73363149 | |end=73363149 | ||
|end_of_center_position=73363134 | |end_of_center_position=73363134 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040{{!}}Bri{{!}}Bri2{{!}}Bricd2b{{!}}D14Sel6{{!}}E25BMM{{!}}imBRI2 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_008410 | |nearest_refseq=NM_008410 | ||
|nearest_unigene=Mm.4266 | |nearest_unigene=Mm.4266 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=73363117 | |start=73363117 | ||
Revision as of 01:25, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73363133 |
|---|---|
| End of the center position in the TSS region: | 73363134 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK002796 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AK002796:0 LF241975:30 MA477552:30 AK218926:76 AK205709:76 AK217202:76 AK209176:76 AK205546:76 AK215843:76 AK192783:76 LF241974:102 MA477551:102 |
TATA-Box annotation
| Distance to TSS: | 22156 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
