Difference between revisions of "TSS:Mm 123932.1"
From referenceTSS
| Line 9: | Line 9: | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=13 | |distance=13 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18772 |
|end=73366539 | |end=73366539 | ||
|end_of_center_position=73366518 | |end_of_center_position=73366518 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040{{!}}Bri{{!}}Bri2{{!}}Bricd2b{{!}}D14Sel6{{!}}E25BMM{{!}}imBRI2 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 33: | Line 33: | ||
|start_of_center_position=73366517 | |start_of_center_position=73366517 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-73(ACATTTAAAAGC,-,0.00) |
|transcript_name=AK194069 AK204304 | |transcript_name=AK194069 AK204304 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 01:26, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73366517 |
|---|---|
| End of the center position in the TSS region: | 73366518 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK194069 AK204304 |
|---|---|
| Distance: | 13 |
| Num_trans: | 2 |
| All_trans: | AK194069:13 AK204304:13 |
TATA-Box annotation
| Distance to TSS: | 18772 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -73(ACATTTAAAAGC,-,0.00) |
