Difference between revisions of "TSS:Mm 137525.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENSMUST00000231774.1:0 ENSMUST00000231649.1:0 ENSMUST00000232349.1:0 ENSMUST00000231950.1:0 NR_168735:0 NR_168736:0 NR_168737:0 NR_168738:0 NR_167661:0 LF200982:0 MA436559:0 AK138223:0 ENSMUST00000151398.2:-5 DQ725710:-13 DQ691146:-13 DQ694975:21 DQ716758:-23 DQ703667:92 DQ563477:-98 DQ697383:-112 DQ557880:-112 DQ706936:-127 DQ706539:-127 DQ557090:127 DQ557091:127 DQ685595:-128 DQ714402:-128 DQ695066:-130 DQ568626:-130 DQ696274:-133 DQ550967:-133 DQ717226:-133 DQ721863:-133 DQ698351:-133 DQ697811:144 DQ697615:144 DQ552522:-150 DQ555488:-152 DQ555489:-152 AB251303:-166 DQ686976:197 DQ688159:197 DQ702071:197 DQ692356:197 DQ540402:-202 DQ715032:207 DQ717903:207 DQ564552:207 DQ694812:207 DQ548362:214 DQ547862:220 DQ556553:220 DQ547863:220 DQ713248:-230 DQ715321:-237 DQ699625:-248 DQ553726:-248 DQ700782:-248 DQ553727:-248 DQ701127:-251 DQ698374:-260 DQ688215:296 DQ547532:-304 DQ709480:-331 DQ708637:-331 DQ565211:-333 DQ719562:-334 DQ720291:-335 DQ710960:-335 DQ562989:-335 DQ717377:-335 DQ713278:-335 DQ700062:-335 DQ544273:335 DQ696664:-340 DQ719393:-340 DQ710157:-340 DQ697330:-342 DQ714770:-345 DQ696082:-345 DQ696696:-345 DQ709206:-349 DQ706819:-364 DQ692433:382 DQ703347:382 DQ552722:-389 DQ552723:-389 DQ723540:-389 DQ550574:394 DQ715147:-395 DQ702731:-395 DQ562045:-396 DQ562046:-396 DQ558352:-398 DQ698008:400 DQ705808:400 DQ726332:403 DQ713587:-409 DQ712752:-416 DQ700573:-417 DQ714002:485 DQ717416:487 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_106076 | |nearest_refseq=NR_106076 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=102 |
|species=mouse | |species=mouse | ||
|start=27342453 | |start=27342453 | ||
|start_of_center_position=27342461 | |start_of_center_position=27342461 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000231774.1 ENSMUST00000231649.1 ENSMUST00000232349.1 ENSMUST00000231950.1 NR_168735 NR_168736 NR_168737 NR_168738 NR_167661 LF200982 MA436559 AK138223 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_137525.1 | |tss_id=mm_137525.1 | ||
Revision as of 06:46, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27342461 |
|---|---|
| End of the center position in the TSS region: | 27342462 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000231774.1 ENSMUST00000231649.1 ENSMUST00000232349.1 ENSMUST00000231950.1 NR_168735 NR_168736 NR_168737 NR_168738 NR_167661 LF200982 MA436559 AK138223 |
|---|---|
| Distance: | 0 |
| Num_trans: | 102 |
| All_trans: | ENSMUST00000231774.1:0 ENSMUST00000231649.1:0 ENSMUST00000232349.1:0 ENSMUST00000231950.1:0 NR_168735:0 NR_168736:0 NR_168737:0 NR_168738:0 NR_167661:0 LF200982:0 MA436559:0 AK138223:0 ENSMUST00000151398.2:-5 DQ725710:-13 DQ691146:-13 DQ694975:21 DQ716758:-23 DQ703667:92 DQ563477:-98 DQ697383:-112 DQ557880:-112 DQ706936:-127 DQ706539:-127 DQ557090:127 DQ557091:127 DQ685595:-128 DQ714402:-128 DQ695066:-130 DQ568626:-130 DQ696274:-133 DQ550967:-133 DQ717226:-133 DQ721863:-133 DQ698351:-133 DQ697811:144 DQ697615:144 DQ552522:-150 DQ555488:-152 DQ555489:-152 AB251303:-166 DQ686976:197 DQ688159:197 DQ702071:197 DQ692356:197 DQ540402:-202 DQ715032:207 DQ717903:207 DQ564552:207 DQ694812:207 DQ548362:214 DQ547862:220 DQ556553:220 DQ547863:220 DQ713248:-230 DQ715321:-237 DQ699625:-248 DQ553726:-248 DQ700782:-248 DQ553727:-248 DQ701127:-251 DQ698374:-260 DQ688215:296 DQ547532:-304 DQ709480:-331 DQ708637:-331 DQ565211:-333 DQ719562:-334 DQ720291:-335 DQ710960:-335 DQ562989:-335 DQ717377:-335 DQ713278:-335 DQ700062:-335 DQ544273:335 DQ696664:-340 DQ719393:-340 DQ710157:-340 DQ697330:-342 DQ714770:-345 DQ696082:-345 DQ696696:-345 DQ709206:-349 DQ706819:-364 DQ692433:382 DQ703347:382 DQ552722:-389 DQ552723:-389 DQ723540:-389 DQ550574:394 DQ715147:-395 DQ702731:-395 DQ562045:-396 DQ562046:-396 DQ558352:-398 DQ698008:400 DQ705808:400 DQ726332:403 DQ713587:-409 DQ712752:-416 DQ700573:-417 DQ714002:485 DQ717416:487 |
TATA-Box annotation
| Distance to TSS: | -13276 |
|---|---|
| Nearest PromoterID: | NR_106076 |
| Entrez ID: | 102465701 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106076 |
| Nearest Ensembl: | ENSMUSG00000106578 |
| Gene Name: | predicted gene 10505 |
| Gene Alias: | mmu-mir-7217 |
| Gene Description: | microRNA 7217 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
