Difference between revisions of "TSS:Mm 160815.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Irlgs2= |
| + | |SP2= | ||
| + | |U2af1-rs1= | ||
| + | |U2afbp-rs= | ||
| + | |all_trans=BC098462:-167 ENSMUST00000161944.1:-422 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-15480 | |distance_to_tss=-15480 | ||
|end=22956525 | |end=22956525 | ||
| + | |end_of_center_position=22956525 | ||
|entrez_id=22183 | |entrez_id=22183 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=D11Ncvs75 | + | |gene_alias=D11Ncvs75{{!}}Irlgs2{{!}}SP2{{!}}U2af1-rs1{{!}}U2afbp-rs |
| − | |gene_description= | + | |gene_description=zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 |
|gene_id=53625 | |gene_id=53625 | ||
| − | |gene_name= | + | |gene_name=Zrsr1 |
|gene_source=MGI:1889505 | |gene_source=MGI:1889505 | ||
|gene_symbol=B3gnt2 | |gene_symbol=B3gnt2 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_011663 | |nearest_refseq=NM_011663 | ||
|nearest_unigene=Mm.29542 | |nearest_unigene=Mm.29542 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=22956524 | |start=22956524 | ||
| + | |start_of_center_position=22956524 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC098462 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_160815.1 | |tss_id=mm_160815.1 | ||
Latest revision as of 15:46, 20 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 22956524 |
|---|---|
| End of the center position in the TSS region: | 22956525 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC098462 |
|---|---|
| Distance: | -167 |
| Num_trans: | 2 |
| All_trans: | BC098462:-167 ENSMUST00000161944.1:-422 |
TATA-Box annotation
| Distance to TSS: | -15480 |
|---|---|
| Nearest PromoterID: | NM_011663 |
| Entrez ID: | 22183 |
| Nearest Unigene: | Mm.29542 |
| Nearest Refseq: | NM_011663 |
| Nearest Ensembl: | ENSMUSG00000044068 |
| Gene Name: | Zrsr1 |
| Gene Alias: | D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs |
| Gene Description: | zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
