Difference between revisions of "TSS:Mm 162980.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Hspc159= | |Hspc159= | ||
|Lgalsla= | |Lgalsla= | ||
| − | |all_trans=ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752 | + | |all_trans=ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752:-307 AK156350:-435 AB341430:440 AK193913:485 AK204490:485 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 13: | Line 13: | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik{{!}}A530071M23{{!}}Grpa{{!}}Hspc159{{!}}Lgalsla |
| − | |gene_description= | + | |gene_description=lectin, galactoside binding-like |
|gene_id=216551 | |gene_id=216551 | ||
| − | |gene_name= | + | |gene_name=lectin, galactoside binding-like |
|gene_source=MGI:1916114 | |gene_source=MGI:1916114 | ||
|gene_symbol=Lgalsl | |gene_symbol=Lgalsl | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_173752 | |nearest_refseq=NM_173752 | ||
|nearest_unigene=Mm.76694 | |nearest_unigene=Mm.76694 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=20830778 | |start=20830778 | ||
Revision as of 16:34, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20830789 |
|---|---|
| End of the center position in the TSS region: | 20830790 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000144441.7 |
|---|---|
| Distance: | 24 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752:-307 AK156350:-435 AB341430:440 AK193913:485 AK204490:485 |
TATA-Box annotation
| Distance to TSS: | 318 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | lectin, galactoside binding-like |
| Gene Alias: | 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla |
| Gene Description: | lectin, galactoside binding-like |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
