Difference between revisions of "TSS:Mm 28434.1"
From referenceTSS
| Line 4: | Line 4: | ||
|NPRA= | |NPRA= | ||
|Pndr= | |Pndr= | ||
| − | |all_trans=ENSMUST00000029540.12:0 NM_008727 | + | |all_trans=ENSMUST00000029540.12:0 NM_008727:0 BC110659:113 BC139767:132 L31932:345 J05504:-464 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 13: | Line 13: | ||
|entrez_id=18160 | |entrez_id=18160 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=AI893888 | + | |gene_alias=AI893888{{!}}GC-A{{!}}NPR-A{{!}}NPRA{{!}}Pndr |
|gene_description=natriuretic peptide receptor 1 | |gene_description=natriuretic peptide receptor 1 | ||
|gene_id=18160 | |gene_id=18160 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_008727 | |nearest_refseq=NM_008727 | ||
|nearest_unigene=Mm.4627 | |nearest_unigene=Mm.4627 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=90465858 | |start=90465858 | ||
|start_of_center_position=90465866 | |start_of_center_position=90465866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000029540.12 NM_008727 | + | |transcript_name=ENSMUST00000029540.12 NM_008727 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_28434.1 | |tss_id=mm_28434.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q2TAY4 Q3UY30 |
}} | }} | ||
Revision as of 00:48, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 90465866 |
|---|---|
| End of the center position in the TSS region: | 90465867 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000029540.12 NM_008727 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000029540.12:0 NM_008727:0 BC110659:113 BC139767:132 L31932:345 J05504:-464 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_008727 |
| Entrez ID: | 18160 |
| Nearest Unigene: | Mm.4627 |
| Nearest Refseq: | NM_008727 |
| Nearest Ensembl: | ENSMUSG00000027931 |
| Gene Name: | natriuretic peptide receptor 1 |
| Gene Alias: | AI893888|GC-A|NPR-A|NPRA|Pndr |
| Gene Description: | natriuretic peptide receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
