Difference between revisions of "TSS:Mm 32425.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000145510 | + | |all_trans=ENSMUST00000145510.1:-415 AK084081:-415 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172873 | |nearest_refseq=NM_172873 | ||
|nearest_unigene=Mm.257231 | |nearest_unigene=Mm.257231 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=107127027 | |start=107127027 | ||
|start_of_center_position=107127028 | |start_of_center_position=107127028 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000145510 | + | |transcript_name=ENSMUST00000145510.1 AK084081 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_32425.1 | |tss_id=mm_32425.1 | ||
Revision as of 02:20, 21 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 107127028 |
|---|---|
| End of the center position in the TSS region: | 107127029 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000145510.1 AK084081 |
|---|---|
| Distance: | -415 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000145510.1:-415 AK084081:-415 |
TATA-Box annotation
| Distance to TSS: | 30138 |
|---|---|
| Nearest PromoterID: | NM_172873 |
| Entrez ID: | 242603 |
| Nearest Unigene: | Mm.257231 |
| Nearest Refseq: | NM_172873 |
| Nearest Ensembl: | ENSMUSG00000047636 |
| Gene Name: | predicted gene 12802 |
| Gene Alias: | D030010E02Rik |
| Gene Description: | CUB domain containing protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
