Difference between revisions of "TSS:Mm 60060.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ENSMUSG00000074193= | |ENSMUSG00000074193= | ||
| − | |all_trans=ENSMUST00000190947.1:253 NR_046062 | + | |all_trans=ENSMUST00000190947.1:253 NR_046062:253 AK133438:253 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_046062 | |nearest_refseq=NR_046062 | ||
|nearest_unigene=Mm.387223 | |nearest_unigene=Mm.387223 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=31162097 | |start=31162097 | ||
|start_of_center_position=31162101 | |start_of_center_position=31162101 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000190947.1 NR_046062 | + | |transcript_name=ENSMUST00000190947.1 NR_046062 AK133438 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_60060.1 | |tss_id=mm_60060.1 | ||
Revision as of 12:59, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 31162101 |
|---|---|
| End of the center position in the TSS region: | 31162102 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000190947.1 NR_046062 AK133438 |
|---|---|
| Distance: | 253 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000190947.1:253 NR_046062:253 AK133438:253 |
TATA-Box annotation
| Distance to TSS: | -257 |
|---|---|
| Nearest PromoterID: | NR_046062 |
| Entrez ID: | 100038516 |
| Nearest Unigene: | Mm.387223 |
| Nearest Refseq: | NR_046062 |
| Nearest Ensembl: | ENSMUSG00000100985 |
| Gene Name: | predicted gene 10640 |
| Gene Alias: | EG668322 |
| Gene Description: | predicted gene 10640 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
