Difference between revisions of "TSS:Mm 69876.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000181275.1:-20 NR_040337 | + | |all_trans=ENSMUST00000181275.1:-20 NR_040337:-20 AK016549:-20 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=predicted gene, 16982 |
|gene_id=100036523 | |gene_id=100036523 | ||
| − | |gene_name= | + | |gene_name=predicted gene, 16982 |
|gene_source=MGI:4439906 | |gene_source=MGI:4439906 | ||
|gene_symbol=Gm16982 | |gene_symbol=Gm16982 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_040337 | |nearest_refseq=NR_040337 | ||
|nearest_unigene=Mm.398994 | |nearest_unigene=Mm.398994 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=141613712 | |start=141613712 | ||
|start_of_center_position=141613719 | |start_of_center_position=141613719 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000181275.1 NR_040337 | + | |transcript_name=ENSMUST00000181275.1 NR_040337 AK016549 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_69876.1 | |tss_id=mm_69876.1 | ||
Revision as of 16:45, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 141613719 |
|---|---|
| End of the center position in the TSS region: | 141613720 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000181275.1 NR_040337 AK016549 |
|---|---|
| Distance: | -20 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000181275.1:-20 NR_040337:-20 AK016549:-20 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NR_040337 |
| Entrez ID: | 100036523 |
| Nearest Unigene: | Mm.398994 |
| Nearest Refseq: | NR_040337 |
| Nearest Ensembl: | ENSMUSG00000097170 |
| Gene Name: | predicted gene, 16982 |
| Gene Alias: | - |
| Gene Description: | predicted gene, 16982 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
