Difference between revisions of "TSS:Mm 72103.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000143662.7:-51 | + | |all_trans=NM_001166213:0 NM_001384129:0 ENSMUST00000143662.7:-51 ENSMUST00000124485.7:64 AK158308:64 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=62 | |distance_to_tss=62 | ||
|end=71597718 | |end=71597718 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=Bcnp1 | |gene_alias=Bcnp1 | ||
| − | |gene_description= | + | |gene_description=family with sequence similarity 129, member C |
|gene_id=100037278 | |gene_id=100037278 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 3 |
|gene_source=MGI:3686743 | |gene_source=MGI:3686743 | ||
| − | |gene_symbol= | + | |gene_symbol=Niban3 |
| − | |gene_synonyms=Bcnp1 | + | |gene_synonyms=Bcnp1 Fam129c |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3686743 | |hgnc_mgi_id=MGI:3686743 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=71597708 | |start_of_center_position=71597708 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001166213 NM_001384129 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_72103.1 | |tss_id=mm_72103.1 | ||
Revision as of 17:36, 21 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 71597708 |
|---|---|
| End of the center position in the TSS region: | 71597709 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001166213 NM_001384129 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NM_001166213:0 NM_001384129:0 ENSMUST00000143662.7:-51 ENSMUST00000124485.7:64 AK158308:64 |
TATA-Box annotation
| Distance to TSS: | 62 |
|---|---|
| Nearest PromoterID: | NM_001166213 |
| Entrez ID: | 100037278 |
| Nearest Unigene: | Mm.482159 |
| Nearest Refseq: | NM_001166213 |
| Nearest Ensembl: | ENSMUSG00000043243 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | Bcnp1 |
| Gene Description: | family with sequence similarity 129, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
