Difference between revisions of "TSS:Mm 79221.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ENSMUSG00000079564= | |ENSMUSG00000079564= | ||
| − | |all_trans=BC049643:0 ENSMUST00000068730.3:4 AK017085:4 | + | |all_trans=ENSMUST00000215465.1:0 BC049643:0 ENSMUST00000068730.3:4 AK017085:4 ENSMUST00000216483.1:-25 NR_029465:-25 AK015955:-25 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 10: | Line 10: | ||
|entrez_id=100036537 | |entrez_id=100036537 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11149 | |gene_description=predicted gene 11149 | ||
|gene_id=100036537 | |gene_id=100036537 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=49518322 | |start_of_center_position=49518322 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC049643 | + | |transcript_name=ENSMUST00000215465.1 BC049643 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_79221.1 | |tss_id=mm_79221.1 | ||
Revision as of 20:16, 21 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 49518322 |
|---|---|
| End of the center position in the TSS region: | 49518323 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000215465.1 BC049643 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000215465.1:0 BC049643:0 ENSMUST00000068730.3:4 AK017085:4 ENSMUST00000216483.1:-25 NR_029465:-25 AK015955:-25 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NR_029465 |
| Entrez ID: | 100036537 |
| Nearest Unigene: | Mm.437541 |
| Nearest Refseq: | NR_029465 |
| Nearest Ensembl: | ENSMUSG00000079564 |
| Gene Name: | predicted gene 11149 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11149 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
