Difference between revisions of "TSS:Mm 83958.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000128125.1:44 AK143982:44 AK085949:-94 ENSMUST00000135527.1:-104 NR_045886 | + | |all_trans=ENSMUST00000128125.1:44 AK143982:44 AK085949:-94 ENSMUST00000135527.1:-104 NR_045886:-104 AK162906:-104 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 9: | Line 9: | ||
|entrez_id=100038566 | |entrez_id=100038566 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10658 | |gene_description=predicted gene 10658 | ||
|gene_id=100038566 | |gene_id=100038566 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_045886 | |nearest_refseq=NR_045886 | ||
|nearest_unigene=Mm.361900 | |nearest_unigene=Mm.361900 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=57071850 | |start=57071850 | ||
Revision as of 22:02, 21 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 57071856 |
|---|---|
| End of the center position in the TSS region: | 57071857 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000128125.1 AK143982 |
|---|---|
| Distance: | 44 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000128125.1:44 AK143982:44 AK085949:-94 ENSMUST00000135527.1:-104 NR_045886:-104 AK162906:-104 |
TATA-Box annotation
| Distance to TSS: | 110 |
|---|---|
| Nearest PromoterID: | NR_045886 |
| Entrez ID: | 100038566 |
| Nearest Unigene: | Mm.361900 |
| Nearest Refseq: | NR_045886 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 10658 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10658 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
