Difference between revisions of "TSS:Mm 88379.1"
From referenceTSS
| Line 3: | Line 3: | ||
|KEN= | |KEN= | ||
|Pcnt2= | |Pcnt2= | ||
| − | |all_trans=AK015109:0 | + | |all_trans=LF198076:0 MA433653:0 AK015109:0 LF223139:226 MA458716:226 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 12: | Line 12: | ||
|entrez_id=18541 | |entrez_id=18541 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=AW476095 | + | |gene_alias=AW476095{{!}}C86676{{!}}KEN{{!}}Pcnt2{{!}}kendrin{{!}}m239Asp{{!}}m275Asp |
|gene_description=pericentrin (kendrin) | |gene_description=pericentrin (kendrin) | ||
|gene_id=100036541 | |gene_id=100036541 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_008787 | |nearest_refseq=NM_008787 | ||
|nearest_unigene=Mm.251794 | |nearest_unigene=Mm.251794 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=76442368 | |start=76442368 | ||
|start_of_center_position=76442380 | |start_of_center_position=76442380 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK015109 | + | |transcript_name=LF198076 MA433653 AK015109 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_88379.1 | |tss_id=mm_88379.1 | ||
Revision as of 23:41, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76442380 |
|---|---|
| End of the center position in the TSS region: | 76442381 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF198076 MA433653 AK015109 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | LF198076:0 MA433653:0 AK015109:0 LF223139:226 MA458716:226 |
TATA-Box annotation
| Distance to TSS: | 531 |
|---|---|
| Nearest PromoterID: | NM_008787 |
| Entrez ID: | 18541 |
| Nearest Unigene: | Mm.251794 |
| Nearest Refseq: | NM_008787 |
| Nearest Ensembl: | ENSMUSG00000001151 |
| Gene Name: | predicted gene 9744 |
| Gene Alias: | AW476095|C86676|KEN|Pcnt2|kendrin|m239Asp|m275Asp |
| Gene Description: | pericentrin (kendrin) |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
