Difference between revisions of "TSS:Mm 996.1"
From referenceTSS
| Line 11: | Line 11: | ||
|I-FLICE= | |I-FLICE= | ||
|MRIT= | |MRIT= | ||
| − | |all_trans=ENSMUST00000114309.7:0 ENSMUST00000123553.1:0 NM_009805:0 NM_207653:0 | + | |all_trans=ENSMUST00000114309.7:0 ENSMUST00000123553.1:0 NR_149255:0 NM_009805:0 NM_207653:0 NM_001355056:0 AK143812:0 AK161220:0 ENSMUST00000069333.7:3 BC029223:3 BC085105:249 |
|c-Flip= | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
| Line 21: | Line 21: | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 31: | Line 31: | ||
|hgnc_mgi_id=MGI:1336166 | |hgnc_mgi_id=MGI:1336166 | ||
|nearest_ensembl=ENSMUSG00000026031 | |nearest_ensembl=ENSMUSG00000026031 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_149255 |
|nearest_refseq=NM_009805 | |nearest_refseq=NM_009805 | ||
|nearest_unigene=Mm.336848 | |nearest_unigene=Mm.336848 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=58713241 | |start=58713241 | ||
|start_of_center_position=58713277 | |start_of_center_position=58713277 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000114309.7 ENSMUST00000123553.1 NM_009805 NM_207653 | + | |transcript_name=ENSMUST00000114309.7 ENSMUST00000123553.1 NR_149255 NM_009805 NM_207653 NM_001355056 AK143812 AK161220 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_996.1 | |tss_id=mm_996.1 | ||
Revision as of 03:55, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58713277 |
|---|---|
| End of the center position in the TSS region: | 58713278 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000114309.7 ENSMUST00000123553.1 NR_149255 NM_009805 NM_207653 NM_001355056 AK143812 AK161220 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000114309.7:0 ENSMUST00000123553.1:0 NR_149255:0 NM_009805:0 NM_207653:0 NM_001355056:0 AK143812:0 AK161220:0 ENSMUST00000069333.7:3 BC029223:3 BC085105:249 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NR_149255 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
