Difference between revisions of "TSS:Mm 997.1"
From referenceTSS
| Line 11: | Line 11: | ||
|I-FLICE= | |I-FLICE= | ||
|MRIT= | |MRIT= | ||
| − | |all_trans=ENSMUST00000069333.7:-4 BC029223:-4 ENSMUST00000123553.1:-19 AK161220:-19 | + | |all_trans=ENSMUST00000069333.7:-4 BC029223:-4 ENSMUST00000123553.1:-19 AK161220:-19 ENSMUST00000114309.7:-27 AK143812:-27 NR_149255:-35 NM_009805:-35 NM_207653:-35 NM_001355056:-35 BC085105:231 |
|c-Flip= | |c-Flip= | ||
|chr=chr1 | |chr=chr1 | ||
| Line 21: | Line 21: | ||
|entrez_id=12633 | |entrez_id=12633 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=2310024N18Rik | + | |gene_alias=2310024N18Rik{{!}}A430105C05Rik{{!}}CLARP{{!}}Cash{{!}}Casper{{!}}FLAME{{!}}FLAME-1{{!}}Flip{{!}}Gm9845{{!}}I-FLICE{{!}}MRIT{{!}}c-Flip |
|gene_description=CASP8 and FADD-like apoptosis regulator | |gene_description=CASP8 and FADD-like apoptosis regulator | ||
|gene_id=12633 | |gene_id=12633 | ||
| Line 31: | Line 31: | ||
|hgnc_mgi_id=MGI:1336166 | |hgnc_mgi_id=MGI:1336166 | ||
|nearest_ensembl=ENSMUSG00000026031 | |nearest_ensembl=ENSMUSG00000026031 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_009805 |
|nearest_refseq=NM_009805 | |nearest_refseq=NM_009805 | ||
|nearest_unigene=Mm.336848 | |nearest_unigene=Mm.336848 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=58713320 | |start=58713320 | ||
Revision as of 03:57, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58713326 |
|---|---|
| End of the center position in the TSS region: | 58713327 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000069333.7 BC029223 |
|---|---|
| Distance: | -4 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000069333.7:-4 BC029223:-4 ENSMUST00000123553.1:-19 AK161220:-19 ENSMUST00000114309.7:-27 AK143812:-27 NR_149255:-35 NM_009805:-35 NM_207653:-35 NM_001355056:-35 BC085105:231 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_009805 |
| Entrez ID: | 12633 |
| Nearest Unigene: | Mm.336848 |
| Nearest Refseq: | NM_009805 |
| Nearest Ensembl: | ENSMUSG00000026031 |
| Gene Name: | CASP8 and FADD-like apoptosis regulator |
| Gene Alias: | 2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip |
| Gene Description: | CASP8 and FADD-like apoptosis regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
