Difference between revisions of "TSS:Mm 99879.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ESTM12= | |ESTM12= | ||
|X83328= | |X83328= | ||
| − | |all_trans=ENSMUST00000020929. | + | |all_trans=ENSMUST00000020929.16:0 ENSMUST00000125108.1:0 AK077195:0 AK143908:0 AK004062:0 AK075748:0 ENSMUST00000092500.10:-22 NM_025275:-22 ENSMUST00000238825.1:210 NM_001252193:210 ENSMUST00000103061.2:216 BC025087:216 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 11: | Line 11: | ||
|entrez_id=13929 | |entrez_id=13929 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AA408420 | + | |gene_alias=AA408420{{!}}ESTM12{{!}}X83328 |
|gene_description=archaelysin family metallopeptidase 2 | |gene_description=archaelysin family metallopeptidase 2 | ||
|gene_id=13929 | |gene_id=13929 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025275 | |nearest_refseq=NM_025275 | ||
|nearest_unigene=Mm.211850 | |nearest_unigene=Mm.211850 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=109425967 | |start=109425967 | ||
|start_of_center_position=109425988 | |start_of_center_position=109425988 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000020929. | + | |transcript_name=ENSMUST00000020929.16 ENSMUST00000125108.1 AK077195 AK143908 AK004062 AK075748 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99879.1 | |tss_id=mm_99879.1 | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109425988 |
|---|---|
| End of the center position in the TSS region: | 109425989 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000020929.16 ENSMUST00000125108.1 AK077195 AK143908 AK004062 AK075748 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000020929.16:0 ENSMUST00000125108.1:0 AK077195:0 AK143908:0 AK004062:0 AK075748:0 ENSMUST00000092500.10:-22 NM_025275:-22 ENSMUST00000238825.1:210 NM_001252193:210 ENSMUST00000103061.2:216 BC025087:216 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_025275 |
| Entrez ID: | 13929 |
| Nearest Unigene: | Mm.211850 |
| Nearest Refseq: | NM_025275 |
| Nearest Ensembl: | ENSMUSG00000020610 |
| Gene Name: | archaelysin family metallopeptidase 2 |
| Gene Alias: | AA408420|ESTM12|X83328 |
| Gene Description: | archaelysin family metallopeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
