Difference between revisions of "TSS:Mm 99922.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Prkmk6= | |Prkmk6= | ||
|SAPKK3= | |SAPKK3= | ||
| − | |all_trans= | + | |all_trans=NM_001356346:-34 ENSMUST00000133920.1:-335 X98067:-335 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance=- | + | |distance=-34 |
| − | |distance_to_tss= | + | |distance_to_tss=40 |
|end=110479386 | |end=110479386 | ||
|end_of_center_position=110479380 | |end_of_center_position=110479380 | ||
|entrez_id=26399 | |entrez_id=26399 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=MEK6 | + | |gene_alias=MAPKK 6{{!}}MAPKK6{{!}}MEK6{{!}}MKK6{{!}}Prkmk6{{!}}SAPKK3 |
|gene_description=mitogen-activated protein kinase kinase 6 | |gene_description=mitogen-activated protein kinase kinase 6 | ||
|gene_id=26399 | |gene_id=26399 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1346870 | |hgnc_mgi_id=MGI:1346870 | ||
|nearest_ensembl=ENSMUSG00000020623 | |nearest_ensembl=ENSMUSG00000020623 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001356346 |
|nearest_refseq=NM_011943 | |nearest_refseq=NM_011943 | ||
|nearest_unigene=Mm.14487 | |nearest_unigene=Mm.14487 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=110479379 | |start_of_center_position=110479379 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001356346 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99922.1 | |tss_id=mm_99922.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 04:02, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 110479379 |
|---|---|
| End of the center position in the TSS region: | 110479380 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001356346 |
|---|---|
| Distance: | -34 |
| Num_trans: | 3 |
| All_trans: | NM_001356346:-34 ENSMUST00000133920.1:-335 X98067:-335 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001356346 |
| Entrez ID: | 26399 |
| Nearest Unigene: | Mm.14487 |
| Nearest Refseq: | NM_011943 |
| Nearest Ensembl: | ENSMUSG00000020623 |
| Gene Name: | mitogen-activated protein kinase kinase 6 |
| Gene Alias: | MAPKK 6|MAPKK6|MEK6|MKK6|Prkmk6|SAPKK3 |
| Gene Description: | mitogen-activated protein kinase kinase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
