Difference between revisions of "TSS:Mm 99962.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK019727:0 | + | |all_trans=AK019727:0 AK171307:380 ENSMUST00000042227.14:386 BC048942:386 NM_177777:408 NM_001361593:408 ENSMUST00000123466.1:414 AK139389:414 ENSMUST00000106621.3:421 AK017508:421 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-102 |
|end=113684026 | |end=113684026 | ||
|end_of_center_position=113684024 | |end_of_center_position=113684024 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=D11Wsu99e | |gene_alias=D11Wsu99e | ||
| − | |gene_description= | + | |gene_description=family with sequence similarity 104, member A |
|gene_id=78188 | |gene_id=78188 | ||
|gene_name=RIKEN cDNA 4930539H15 gene | |gene_name=RIKEN cDNA 4930539H15 gene | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1925438 | |hgnc_mgi_id=MGI:1925438 | ||
|nearest_ensembl=ENSMUSG00000041629 | |nearest_ensembl=ENSMUSG00000041629 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362751 |
|nearest_refseq=NM_138598 | |nearest_refseq=NM_138598 | ||
|nearest_unigene=Mm.351688 | |nearest_unigene=Mm.351688 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=113684021 | |start=113684021 | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 113684023 |
|---|---|
| End of the center position in the TSS region: | 113684024 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK019727 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK019727:0 AK171307:380 ENSMUST00000042227.14:386 BC048942:386 NM_177777:408 NM_001361593:408 ENSMUST00000123466.1:414 AK139389:414 ENSMUST00000106621.3:421 AK017508:421 |
TATA-Box annotation
| Distance to TSS: | -102 |
|---|---|
| Nearest PromoterID: | NM_001362751 |
| Entrez ID: | 28081 |
| Nearest Unigene: | Mm.351688 |
| Nearest Refseq: | NM_138598 |
| Nearest Ensembl: | ENSMUSG00000041629 |
| Gene Name: | RIKEN cDNA 4930539H15 gene |
| Gene Alias: | D11Wsu99e |
| Gene Description: | family with sequence similarity 104, member A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
