Difference between revisions of "TSS:Mm 99989.1"
From referenceTSS
| Line 6: | Line 6: | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-16 | |distance=-16 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-7021 |
|end=114720400 | |end=114720400 | ||
|end_of_center_position=114720398 | |end_of_center_position=114720398 | ||
|entrez_id=432611 | |entrez_id=432611 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=C030015H18Rik | + | |gene_alias=C030015H18Rik{{!}}Dnai2{{!}}Gm728{{!}}b2b3405Clo |
| − | |gene_description= | + | |gene_description=dynein, axonemal, intermediate chain 2 |
|gene_id=117160 | |gene_id=117160 | ||
|gene_name=tweety family member 2 | |gene_name=tweety family member 2 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=114720397 | |start_of_center_position=114720397 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=53(GCCTTGTAAAGG,-,0.00) |
|transcript_name=AK003193 | |transcript_name=AK003193 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114720397 |
|---|---|
| End of the center position in the TSS region: | 114720398 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK003193 |
|---|---|
| Distance: | -16 |
| Num_trans: | 1 |
| All_trans: | AK003193:-16 |
TATA-Box annotation
| Distance to TSS: | -7021 |
|---|---|
| Nearest PromoterID: | NM_001034878 |
| Entrez ID: | 432611 |
| Nearest Unigene: | Mm.212764 |
| Nearest Refseq: | NM_001034878 |
| Nearest Ensembl: | ENSMUSG00000034706 |
| Gene Name: | tweety family member 2 |
| Gene Alias: | C030015H18Rik|Dnai2|Gm728|b2b3405Clo |
| Gene Description: | dynein, axonemal, intermediate chain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 53(GCCTTGTAAAGG,-,0.00) |
