Difference between revisions of "TSS:Hg 100101.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF355499:-8 MA591076:-8 LF355500:-119 MA591077:-119 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-8 |
| − | |distance_to_tss=- | + | |distance_to_tss=-220468 |
|end=16506351 | |end=16506351 | ||
| − | |entrez_id= | + | |end_of_center_position=16506347 |
| + | |entrez_id=111216284 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=BNC2 antisense RNA 1 |
| − | |gene_name= | + | |gene_name=BNC2-AS1 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000234779 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_151723 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_151723 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.609218 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=16506341 | |start=16506341 | ||
| + | |start_of_center_position=16506346 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355499 MA591076 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_100101.1 | |tss_id=hg_100101.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:37, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16506346 |
|---|---|
| End of the center position in the TSS region: | 16506347 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF355499 MA591076 |
|---|---|
| Distance: | -8 |
| Num_trans: | 4 |
| All_trans: | LF355499:-8 MA591076:-8 LF355500:-119 MA591077:-119 |
TATA-Box annotation
| Distance to TSS: | -220468 |
|---|---|
| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | BNC2-AS1 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
