Difference between revisions of "TSS:Hg 100855.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=ENST00000377126.3 | + | |all_trans=LF345226:96 MA580803:96 LF345227:332 MA580804:332 ENST00000377126.3:-498 D31716:-498 S72504:-498 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=96 |
|distance_to_tss=543 | |distance_to_tss=543 | ||
|end=70414126 | |end=70414126 | ||
| Line 10: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB{{!}}BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=70414102 | |start=70414102 | ||
|start_of_center_position=70414114 | |start_of_center_position=70414114 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-55(CCTTTTAAATGT,+,0.00) |
| − | |transcript_name= | + | |transcript_name=LF345226 MA580803 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_100855.1 | |tss_id=hg_100855.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A024R260 Q13886 | |uniprot_id=A0A024R260 Q13886 | ||
}} | }} | ||
Latest revision as of 17:52, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70414114 |
|---|---|
| End of the center position in the TSS region: | 70414115 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345226 MA580803 |
|---|---|
| Distance: | 96 |
| Num_trans: | 7 |
| All_trans: | LF345226:96 MA580803:96 LF345227:332 MA580804:332 ENST00000377126.3:-498 D31716:-498 S72504:-498 |
TATA-Box annotation
| Distance to TSS: | 543 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB|BTEB1 |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -55(CCTTTTAAATGT,+,0.00) |
