Difference between revisions of "TSS:Hg 101256.1"
From referenceTSS
| Line 32: | Line 32: | ||
|tata_box=-29(GTTTTTAAAACC,+,0.00) | |tata_box=-29(GTTTTTAAAACC,+,0.00) | ||
|transcript_name=AY904367 KU178572 KU178573 KU178574 KU178575 KU178576 KU178577 | |transcript_name=AY904367 KU178572 KU178573 KU178574 KU178575 KU178576 KU178577 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_101256.1 | |tss_id=hg_101256.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A0S2Z535 A0A0S2Z552 A0A0S2Z557 A0A0S2Z562 A0A0S2Z566 | |uniprot_id=A0A0S2Z535 A0A0S2Z552 A0A0S2Z557 A0A0S2Z562 A0A0S2Z566 | ||
}} | }} | ||
Revision as of 18:00, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 87974241 |
|---|---|
| End of the center position in the TSS region: | 87974242 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY904367 KU178572 KU178573 KU178574 KU178575 KU178576 KU178577 |
|---|---|
| Distance: | -186 |
| Num_trans: | 29 |
| All_trans: | AY904367:-186 KU178572:-186 KU178573:-186 KU178574:-186 KU178575:-186 KU178576:-186 KU178577:-186 ENST00000375871.8:-227 ENST00000605159.5:-245 BC002655:-245 AK298993:-263 ENST00000604175.5:-271 ENST00000605591.1:-271 AK296328:-271 ENST00000325303.9:-273 NM_001170639:-273 NM_001039803:-273 AK075325:-273 AK294193:-273 ENST00000603475.1:-274 AK226135:-274 ENST00000336654.9:-329 AF035013:-419 ENST00000459720.5:-425 AF113130:-425 ENST00000486228.7:-441 AK291713:-441 BX647489:-449 ENST00000375883.7:-493 |
TATA-Box annotation
| Distance to TSS: | 291 |
|---|---|
| Nearest PromoterID: | NM_001170639 |
| Entrez ID: | 23552 |
| Nearest Unigene: | Hs.522274 |
| Nearest Refseq: | NM_012119 |
| Nearest Ensembl: | ENSG00000156345 |
| Gene Name: | cyclin dependent kinase 20 |
| Gene Alias: | CCRK|CDCH|P42|PNQALRE |
| Gene Description: | cyclin dependent kinase 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -29(GTTTTTAAAACC,+,0.00) |
