Difference between revisions of "TSS:Hg 102187.1"
From referenceTSS
| Line 32: | Line 32: | ||
|tata_box=43(GACTATATAAAG,-,0.00) | |tata_box=43(GACTATATAAAG,-,0.00) | ||
|transcript_name=BC111939 BC093630 | |transcript_name=BC111939 BC093630 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_102187.1 | |tss_id=hg_102187.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:19, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114930359 |
|---|---|
| End of the center position in the TSS region: | 114930360 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC111939 BC093630 |
|---|---|
| Distance: | -16 |
| Num_trans: | 10 |
| All_trans: | BC111939:-16 BC093630:-16 KJ890862:55 AB590754:55 L09753:-56 ENST00000223795.3:-230 NM_001244:-230 ENST00000618336.4:-234 NM_001252290:-234 AK313619:-234 |
TATA-Box annotation
| Distance to TSS: | 236 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNF superfamily member 8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(GACTATATAAAG,-,0.00) |
