Difference between revisions of "TSS:Hg 10235.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF357457:0 MA593034:0 LF357456:-40 MA593033:-40 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=39835 |
|end=9731325 | |end=9731325 | ||
| − | |entrez_id= | + | |end_of_center_position=9731303 |
| + | |entrez_id=5293 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias= | + | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D |
| − | |gene_description= | + | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| − | |gene_name=PIK3CD | + | |gene_name=PIK3CD |
| − | |gene_type= | + | |gene_type=protein-coding |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000171608 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350235 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_005026 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.518451 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=9731279 | |start=9731279 | ||
| + | |start_of_center_position=9731302 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF357457 MA593034 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_10235.1 | |tss_id=hg_10235.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:23, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9731302 |
|---|---|
| End of the center position in the TSS region: | 9731303 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF357457 MA593034 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | LF357457:0 MA593034:0 LF357456:-40 MA593033:-40 |
TATA-Box annotation
| Distance to TSS: | 39835 |
|---|---|
| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | PIK3CD |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
