Difference between revisions of "TSS:Hg 10236.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK225500:-473 | + | |all_trans=LF357456:0 MA593033:0 LF357457:63 MA593034:63 LF357455:-470 MA593032:-470 AK225500:-473 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=39898 |
|end=9731371 | |end=9731371 | ||
|end_of_center_position=9731366 | |end_of_center_position=9731366 | ||
| − | |entrez_id= | + | |entrez_id=5293 |
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias= | + | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D |
| − | |gene_description= | + | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
|gene_id=22883 | |gene_id=22883 | ||
| − | |gene_name= | + | |gene_name=PIK3CD |
|gene_source=HGNC:17447 | |gene_source=HGNC:17447 | ||
|gene_symbol=CLSTN1 | |gene_symbol=CLSTN1 | ||
|gene_synonyms=CDHR12 CSTN1 KIAA0911 | |gene_synonyms=CDHR12 CSTN1 KIAA0911 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:17447 | |hgnc_mgi_id=HGNC:17447 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000171608 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350235 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_005026 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.518451 |
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=9731359 | |start=9731359 | ||
|start_of_center_position=9731365 | |start_of_center_position=9731365 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF357456 MA593033 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_10236.1 | |tss_id=hg_10236.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:23, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9731365 |
|---|---|
| End of the center position in the TSS region: | 9731366 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF357456 MA593033 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | LF357456:0 MA593033:0 LF357457:63 MA593034:63 LF357455:-470 MA593032:-470 AK225500:-473 |
TATA-Box annotation
| Distance to TSS: | 39898 |
|---|---|
| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | PIK3CD |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
