Difference between revisions of "TSS:Hg 102429.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP= | ||
| + | |FTZ1= | ||
| + | |FTZF1= | ||
| + | |POF7= | ||
| + | |SF-1= | ||
| + | |SF1= | ||
| + | |SPGF8= | ||
| + | |SRXY3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=9045 | ||
| + | |end=124498372 | ||
| + | |end_of_center_position=124498355 | ||
|entrez_id=2516 | |entrez_id=2516 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=AD4BP | + | |gene_alias=AD4BP{{!}}ELP{{!}}FTZ1{{!}}FTZF1{{!}}POF7{{!}}SF-1{{!}}SF1{{!}}SPGF8{{!}}SRXX4{{!}}SRXY3{{!}}hSF-1 |
|gene_description=nuclear receptor subfamily 5 group A member 1 | |gene_description=nuclear receptor subfamily 5 group A member 1 | ||
|gene_name=NR5A1 | |gene_name=NR5A1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSF-1= | ||
|nearest_ensembl=ENSG00000136931 | |nearest_ensembl=ENSG00000136931 | ||
|nearest_promoter_id=NM_004959 | |nearest_promoter_id=NM_004959 | ||
|nearest_refseq=NM_004959 | |nearest_refseq=NM_004959 | ||
|nearest_unigene=Hs.495108 | |nearest_unigene=Hs.495108 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=124498336 | ||
| + | |start_of_center_position=124498354 | ||
| + | |strand=- | ||
| + | |tata_box=28(TTCTCTAAAGGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102429.1 | |tss_id=hg_102429.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:24, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124498354 |
|---|---|
| End of the center position in the TSS region: | 124498355 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9045 |
|---|---|
| Nearest PromoterID: | NM_004959 |
| Entrez ID: | 2516 |
| Nearest Unigene: | Hs.495108 |
| Nearest Refseq: | NM_004959 |
| Nearest Ensembl: | ENSG00000136931 |
| Gene Name: | NR5A1 |
| Gene Alias: | AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 |
| Gene Description: | nuclear receptor subfamily 5 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 28(TTCTCTAAAGGG,-,0.00) |
