Difference between revisions of "TSS:Hg 102715.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF346637:-101 MA582214:-101 LF346639:-302 MA582216:-302 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-101 |
| − | |distance_to_tss=- | + | |distance_to_tss=-3773 |
|end=128917218 | |end=128917218 | ||
|end_of_center_position=128917210 | |end_of_center_position=128917210 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_174933 | |nearest_refseq=NM_174933 | ||
|nearest_unigene=Hs.709447 | |nearest_unigene=Hs.709447 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=128917200 | |start=128917200 | ||
|start_of_center_position=128917209 | |start_of_center_position=128917209 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF346637 MA582214 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_102715.1 | |tss_id=hg_102715.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:30, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128917209 |
|---|---|
| End of the center position in the TSS region: | 128917210 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346637 MA582214 |
|---|---|
| Distance: | -101 |
| Num_trans: | 4 |
| All_trans: | LF346637:-101 MA582214:-101 LF346639:-302 MA582216:-302 |
TATA-Box annotation
| Distance to TSS: | -3773 |
|---|---|
| Nearest PromoterID: | NM_174933 |
| Entrez ID: | 254295 |
| Nearest Unigene: | Hs.709447 |
| Nearest Refseq: | NM_174933 |
| Nearest Ensembl: | ENSG00000175287 |
| Gene Name: | PHYHD1 |
| Gene Alias: | - |
| Gene Description: | phytanoyl-CoA dioxygenase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
