Difference between revisions of "TSS:Hg 103088.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-1834 |entrez_id=157927 |gc_percent=0.572139 |gene_alias=- |gene_description=chromosome 9 open reading frame 62 |gene_name=C9orf...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=NA | ||
|distance_to_tss=-1834 | |distance_to_tss=-1834 | ||
| + | |end=135341417 | ||
| + | |end_of_center_position=135341416 | ||
|entrez_id=157927 | |entrez_id=157927 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_173520 | |nearest_refseq=NM_173520 | ||
|nearest_unigene=Hs.559511 | |nearest_unigene=Hs.559511 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=135341413 | ||
| + | |start_of_center_position=135341415 | ||
| + | |strand=- | ||
| + | |tata_box=-34(TTCTATAAAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103088.1 | |tss_id=hg_103088.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:38, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 135341415 |
|---|---|
| End of the center position in the TSS region: | 135341416 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -1834 |
|---|---|
| Nearest PromoterID: | NM_173520 |
| Entrez ID: | 157927 |
| Nearest Unigene: | Hs.559511 |
| Nearest Refseq: | NM_173520 |
| Nearest Ensembl: | |
| Gene Name: | C9orf62 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 62 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TTCTATAAAAGC,-,0.00) |
