Difference between revisions of "TSS:Hg 103787.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=1222 |entrez_id=399717 |gc_percent=0.616915 |gene_alias=- |gene_description=GATA3 antisense RNA 1 |gene_name=GATA3-AS1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF346089:114 MA581666:114 ENST00000418270.1:267 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=114 | ||
|distance_to_tss=1222 | |distance_to_tss=1222 | ||
| + | |end=8051274 | ||
| + | |end_of_center_position=8051269 | ||
|entrez_id=399717 | |entrez_id=399717 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_207423 | |nearest_refseq=NM_207423 | ||
|nearest_unigene=Hs.158992 | |nearest_unigene=Hs.158992 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=8051263 | ||
| + | |start_of_center_position=8051268 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF346089 MA581666 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103787.1 | |tss_id=hg_103787.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:52, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8051268 |
|---|---|
| End of the center position in the TSS region: | 8051269 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF346089 MA581666 |
|---|---|
| Distance: | 114 |
| Num_trans: | 3 |
| All_trans: | LF346089:114 MA581666:114 ENST00000418270.1:267 |
TATA-Box annotation
| Distance to TSS: | 1222 |
|---|---|
| Nearest PromoterID: | NR_104329 |
| Entrez ID: | 399717 |
| Nearest Unigene: | Hs.158992 |
| Nearest Refseq: | NM_207423 |
| Nearest Ensembl: | ENSG00000197308 |
| Gene Name: | GATA3-AS1 |
| Gene Alias: | - |
| Gene Description: | GATA3 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
