Difference between revisions of "TSS:Hg 103840.1"
From referenceTSS
| Line 34: | Line 34: | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001326336 NM_001326332 NM_001326331 NM_001025077 NM_001326337 NM_001326335 NM_001326334 NM_001326333 | |transcript_name=NM_001326336 NM_001326332 NM_001326331 NM_001025077 NM_001326337 NM_001326335 NM_001326334 NM_001326333 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_103840.1 | |tss_id=hg_103840.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A0J9YX66 O95319 | |uniprot_id=A0A0J9YX66 O95319 | ||
}} | }} | ||
Revision as of 18:53, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11005122 |
|---|---|
| End of the center position in the TSS region: | 11005123 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001326336 NM_001326332 NM_001326331 NM_001025077 NM_001326337 NM_001326335 NM_001326334 NM_001326333 |
|---|---|
| Distance: | 175 |
| Num_trans: | 17 |
| All_trans: | NM_001326336:175 NM_001326332:175 NM_001326331:175 NM_001025077:175 NM_001326337:175 NM_001326335:175 NM_001326334:175 NM_001326333:175 ENST00000416382.6:184 AF090693:184 ENST00000631460.1:187 ENST00000633200.1:198 AK297380:198 ENST00000631816.1:240 AK299548:240 NM_001326329:-461 NM_001326330:-461 |
TATA-Box annotation
| Distance to TSS: | -189 |
|---|---|
| Nearest PromoterID: | NM_001326332 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR |
| Gene Description: | CUGBP Elav-like family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
