Difference between revisions of "TSS:Hg 104040.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=659 |
|end=17201022 | |end=17201022 | ||
| + | |end_of_center_position=17201014 | ||
|entrez_id=1787 | |entrez_id=1787 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=DMNT2 | + | |gene_alias=DMNT2{{!}}DNMT2{{!}}MHSAIIP{{!}}PUMET{{!}}RNMT1 |
|gene_description=tRNA aspartic acid methyltransferase 1 | |gene_description=tRNA aspartic acid methyltransferase 1 | ||
|gene_name=TRDMT1 | |gene_name=TRDMT1 | ||
| Line 22: | Line 23: | ||
|species=human | |species=human | ||
|start=17201004 | |start=17201004 | ||
| + | |start_of_center_position=17201013 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-100(CTTTTAAAACCA,+,0.00) |
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_104040.1 | |tss_id=hg_104040.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:57, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17201013 |
|---|---|
| End of the center position in the TSS region: | 17201014 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 659 |
|---|---|
| Nearest PromoterID: | NM_001321007 |
| Entrez ID: | 1787 |
| Nearest Unigene: | Hs.351665 |
| Nearest Refseq: | NM_004412 |
| Nearest Ensembl: | ENSG00000107614 |
| Gene Name: | TRDMT1 |
| Gene Alias: | DMNT2|DNMT2|MHSAIIP|PUMET|RNMT1 |
| Gene Description: | tRNA aspartic acid methyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(CTTTTAAAACCA,+,0.00) |
