Difference between revisions of "TSS:Hg 10518.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=25678 |
|end=16130400 | |end=16130400 | ||
|end_of_center_position=16130392 | |end_of_center_position=16130392 | ||
|entrez_id=1969 | |entrez_id=1969 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=ARCC2 | + | |gene_alias=ARCC2{{!}}CTPA{{!}}CTPP1{{!}}CTRCT6{{!}}ECK |
|gene_description=EPH receptor A2 | |gene_description=EPH receptor A2 | ||
|gene_name=EPHA2 | |gene_name=EPHA2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000142627 | |nearest_ensembl=ENSG00000142627 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004431 |
|nearest_refseq=NM_004431 | |nearest_refseq=NM_004431 | ||
|nearest_unigene=Hs.171596 | |nearest_unigene=Hs.171596 | ||
| Line 26: | Line 26: | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_10518.1 | |tss_id=hg_10518.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:20, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16130391 |
|---|---|
| End of the center position in the TSS region: | 16130392 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 25678 |
|---|---|
| Nearest PromoterID: | NM_004431 |
| Entrez ID: | 1969 |
| Nearest Unigene: | Hs.171596 |
| Nearest Refseq: | NM_004431 |
| Nearest Ensembl: | ENSG00000142627 |
| Gene Name: | EPHA2 |
| Gene Alias: | ARCC2|CTPA|CTPP1|CTRCT6|ECK |
| Gene Description: | EPH receptor A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
