Difference between revisions of "TSS:Hg 105348.1"
From referenceTSS
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| Line 9: | Line 9: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=15768 | |distance_to_tss=15768 | ||
|end=69334622 | |end=69334622 | ||
| Line 15: | Line 15: | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=HK | + | |gene_alias=HK{{!}}HK1-ta{{!}}HK1-tb{{!}}HK1-tc{{!}}HKD{{!}}HKI{{!}}HMSNR{{!}}HXK1{{!}}RP79{{!}}hexokinase |
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
|gene_name=HK1 | |gene_name=HK1 | ||
| Line 21: | Line 21: | ||
|hexokinase= | |hexokinase= | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001322367 |
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_105348.1 | |tss_id=hg_105348.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:23, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69334615 |
|---|---|
| End of the center position in the TSS region: | 69334616 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 15768 |
|---|---|
| Nearest PromoterID: | NM_001322367 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | HK1 |
| Gene Alias: | HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
