Difference between revisions of "TSS:Hg 105607.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=36474 |entrez_id=338599 |gc_percent=0.507463 |gene_alias=DUSP27|FMDSP |gene_description=dual specificity phosphatase and pro is...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |FMDSP= | ||
| + | |all_trans=LF333440:-17 MA569017:-17 LF333441:76 MA569018:76 LF333438:-92 MA569015:-92 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=-17 |
| − | |entrez_id= | + | |distance_to_tss=307 |
| + | |end=75022056 | ||
| + | |end_of_center_position=75022041 | ||
| + | |entrez_id=109623471 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=small nucleolar RNA, C/D box 172 |
| − | |gene_name= | + | |gene_name=SNORD172 |
| − | |gene_type= | + | |gene_type=snoRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_145812 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_145812 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=75022024 | ||
| + | |start_of_center_position=75022040 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF333440 MA569017 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105607.1 | |tss_id=hg_105607.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:29, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75022040 |
|---|---|
| End of the center position in the TSS region: | 75022041 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF333440 MA569017 |
|---|---|
| Distance: | -17 |
| Num_trans: | 6 |
| All_trans: | LF333440:-17 MA569017:-17 LF333441:76 MA569018:76 LF333438:-92 MA569015:-92 |
TATA-Box annotation
| Distance to TSS: | 307 |
|---|---|
| Nearest PromoterID: | NR_145812 |
| Entrez ID: | 109623471 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_145812 |
| Nearest Ensembl: | |
| Gene Name: | SNORD172 |
| Gene Alias: | - |
| Gene Description: | small nucleolar RNA, C/D box 172 |
| Gene Type: | snoRNA |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
