Difference between revisions of "TSS:Hg 105969.1"
From referenceTSS
| Line 29: | Line 29: | ||
|tata_box=-34(CGCTATATAAAG,-,0.00) | |tata_box=-34(CGCTATATAAAG,-,0.00) | ||
|transcript_name=ENST00000241891.10 NM_033282 DQ426884 | |transcript_name=ENST00000241891.10 NM_033282 DQ426884 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_105969.1 | |tss_id=hg_105969.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9UHM6 | |uniprot_id=Q9UHM6 | ||
}} | }} | ||
Revision as of 19:36, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 86654547 |
|---|---|
| End of the center position in the TSS region: | 86654548 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000241891.10 NM_033282 DQ426884 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000241891.10:0 NM_033282:0 DQ426884:0 ENST00000372071.6:3 NM_001030015:3 ENST00000443292.1:63 BC029291:63 BC113558:174 BC143688:174 KJ899974:229 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_033282 |
| Entrez ID: | 94233 |
| Nearest Unigene: | Hs.283922 |
| Nearest Refseq: | NM_033282 |
| Nearest Ensembl: | ENSG00000122375 |
| Gene Name: | opsin 4 |
| Gene Alias: | MOP |
| Gene Description: | opsin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CGCTATATAAAG,-,0.00) |
