Difference between revisions of "TSS:Hg 106539.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=5356 |entrez_id=6319 |gc_percent=0.527363 |gene_alias=FADS5|MSTP008|SCD1|SCDOS|hSCD1 |gene_description=stearoyl-CoA desaturase |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MSTP008= | ||
| + | |SCD1= | ||
| + | |SCDOS= | ||
| + | |all_trans=LF345716:8 MA581293:8 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=8 |
| + | |distance_to_tss=5138 | ||
| + | |end=100352380 | ||
| + | |end_of_center_position=100352372 | ||
|entrez_id=6319 | |entrez_id=6319 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=FADS5 | + | |gene_alias=FADS5{{!}}MSTP008{{!}}SCD1{{!}}SCDOS{{!}}hSCD1 |
|gene_description=stearoyl-CoA desaturase | |gene_description=stearoyl-CoA desaturase | ||
|gene_name=SCD | |gene_name=SCD | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSCD1= | ||
|nearest_ensembl=ENSG00000099194 | |nearest_ensembl=ENSG00000099194 | ||
|nearest_promoter_id=NM_005063 | |nearest_promoter_id=NM_005063 | ||
|nearest_refseq=NM_005063 | |nearest_refseq=NM_005063 | ||
|nearest_unigene=Hs.558396 | |nearest_unigene=Hs.558396 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=100352362 | ||
| + | |start_of_center_position=100352371 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF345716 MA581293 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106539.1 | |tss_id=hg_106539.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:48, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 100352371 |
|---|---|
| End of the center position in the TSS region: | 100352372 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF345716 MA581293 |
|---|---|
| Distance: | 8 |
| Num_trans: | 2 |
| All_trans: | LF345716:8 MA581293:8 |
TATA-Box annotation
| Distance to TSS: | 5138 |
|---|---|
| Nearest PromoterID: | NM_005063 |
| Entrez ID: | 6319 |
| Nearest Unigene: | Hs.558396 |
| Nearest Refseq: | NM_005063 |
| Nearest Ensembl: | ENSG00000099194 |
| Gene Name: | SCD |
| Gene Alias: | FADS5|MSTP008|SCD1|SCDOS|hSCD1 |
| Gene Description: | stearoyl-CoA desaturase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
