Difference between revisions of "TSS:Hg 106559.1"
From referenceTSS
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|NCRNA00263= | |NCRNA00263= | ||
|OLMALINCAS= | |OLMALINCAS= | ||
| + | |all_trans=LF345742:210 MA581319:210 LF345739:-214 MA581316:-214 LF345738:-399 MA581315:-399 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=210 |
|distance_to_tss=-11378 | |distance_to_tss=-11378 | ||
|end=100362225 | |end=100362225 | ||
| + | |end_of_center_position=100362199 | ||
|entrez_id=90271 | |entrez_id=90271 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=C10orf75 | + | |gene_alias=C10orf75{{!}}HI-LNC80{{!}}LINC00263{{!}}NCRNA00263{{!}}OLMALINCAS |
|gene_description=oligodendrocyte maturation-associated long intergenic non-coding RNA | |gene_description=oligodendrocyte maturation-associated long intergenic non-coding RNA | ||
|gene_name=OLMALINC | |gene_name=OLMALINC | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000235823 |
|nearest_promoter_id=NR_026762 | |nearest_promoter_id=NR_026762 | ||
|nearest_refseq=NR_026762 | |nearest_refseq=NR_026762 | ||
|nearest_unigene=Hs.628088 | |nearest_unigene=Hs.628088 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=100362171 | |start=100362171 | ||
| + | |start_of_center_position=100362198 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF345742 MA581319 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_106559.1 | |tss_id=hg_106559.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:48, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 100362198 |
|---|---|
| End of the center position in the TSS region: | 100362199 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF345742 MA581319 |
|---|---|
| Distance: | 210 |
| Num_trans: | 6 |
| All_trans: | LF345742:210 MA581319:210 LF345739:-214 MA581316:-214 LF345738:-399 MA581315:-399 |
TATA-Box annotation
| Distance to TSS: | -11378 |
|---|---|
| Nearest PromoterID: | NR_026762 |
| Entrez ID: | 90271 |
| Nearest Unigene: | Hs.628088 |
| Nearest Refseq: | NR_026762 |
| Nearest Ensembl: | ENSG00000235823 |
| Gene Name: | OLMALINC |
| Gene Alias: | C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS |
| Gene Description: | oligodendrocyte maturation-associated long intergenic non-coding RNA |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
