Difference between revisions of "TSS:Hg 232211.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=3 | |distance=3 | ||
|distance_to_tss=-48800 | |distance_to_tss=-48800 | ||
| − | |end= | + | |end=22928074 |
|end_of_center_position=22928074 | |end_of_center_position=22928074 | ||
|entrez_id=100128511 | |entrez_id=100128511 | ||
| Line 24: | Line 24: | ||
|num_trans=18 | |num_trans=18 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=22928073 |
|start_of_center_position=22928073 | |start_of_center_position=22928073 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000496741.5 ENST00000484642.5 AK302104 | |transcript_name=ENST00000496741.5 ENST00000484642.5 AK302104 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232211.1 | |tss_id=hg_232211.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22928073 |
|---|---|
| End of the center position in the TSS region: | 22928074 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000496741.5 ENST00000484642.5 AK302104 |
|---|---|
| Distance: | 3 |
| Num_trans: | 18 |
| All_trans: | ENST00000496741.5:3 ENST00000484642.5:3 AK302104:3 AK057389:7 ENST00000409049.7:-10 AY436643:-10 ENST00000447081.5:11 ENST00000468003.5:11 ENST00000483596.5:12 ENST00000298032.10:-21 NM_001282746:-21 NM_001282745:-21 NM_173081:-21 ENST00000409983.7:-37 AK302985:-37 BC039312:-43 ENST00000376528.8:-50 NM_001282747:-50 |
TATA-Box annotation
| Distance to TSS: | -48800 |
|---|---|
| Nearest PromoterID: | NR_046283 |
| Entrez ID: | 100128511 |
| Nearest Unigene: | Hs.635827 |
| Nearest Refseq: | NR_046283 |
| Nearest Ensembl: | ENSG00000231920 |
| Gene Name: | armadillo repeat containing 3 |
| Gene Alias: | - |
| Gene Description: | NEBL antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
