Difference between revisions of "TSS:Hg 232213.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=60 | |distance=60 | ||
|distance_to_tss=41162 | |distance_to_tss=41162 | ||
| − | |end= | + | |end=23192470 |
|end_of_center_position=23192470 | |end_of_center_position=23192470 | ||
|entrez_id=9576 | |entrez_id=9576 | ||
| Line 26: | Line 26: | ||
|pf16= | |pf16= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=23192469 |
|start_of_center_position=23192469 | |start_of_center_position=23192469 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB463998 BC172252 BC172557 | |transcript_name=AB463998 BC172252 BC172557 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232213.1 | |tss_id=hg_232213.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23192469 |
|---|---|
| End of the center position in the TSS region: | 23192470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB463998 BC172252 BC172557 |
|---|---|
| Distance: | 60 |
| Num_trans: | 6 |
| All_trans: | AB463998:60 BC172252:60 BC172557:60 ENST00000638469.1:94 ENST00000376504.4:-158 NM_178161:-158 |
TATA-Box annotation
| Distance to TSS: | 41162 |
|---|---|
| Nearest PromoterID: | NM_172242 |
| Entrez ID: | 9576 |
| Nearest Unigene: | Hs.655170 |
| Nearest Refseq: | NM_012443 |
| Nearest Ensembl: | ENSG00000077327 |
| Gene Name: | pancreas associated transcription factor 1a |
| Gene Alias: | CT141|Repro-SA-1|pf16 |
| Gene Description: | sperm associated antigen 6 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
