Difference between revisions of "TSS:Hg 232216.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=158 |
| − | |end= | + | |end=23868086 |
|end_of_center_position=23868086 | |end_of_center_position=23868086 | ||
|entrez_id=256297 | |entrez_id=256297 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=PACA | + | |gene_alias=PACA{{!}}PAGEN2{{!}}PTF1-p48{{!}}bHLHa29{{!}}p48 |
| − | |gene_description= | + | |gene_description=pancreas associated transcription factor 1a |
|gene_id=256297 | |gene_id=256297 | ||
| − | |gene_name= | + | |gene_name=PTF1A |
|gene_source=HGNC:23734 | |gene_source=HGNC:23734 | ||
|gene_symbol=PTF1A | |gene_symbol=PTF1A | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_178161 | |nearest_refseq=NM_178161 | ||
|nearest_unigene=Hs.351503 | |nearest_unigene=Hs.351503 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=23868084 |
|start_of_center_position=23868085 | |start_of_center_position=23868085 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232216.1 | |tss_id=hg_232216.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 08:32, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23868085 |
|---|---|
| End of the center position in the TSS region: | 23868086 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AB463998:60 BC172252:60 BC172557:60 NM_178161:61 ENST00000376504.3:-143 uc001irp.4:-143 |
TATA-Box annotation
| Distance to TSS: | 158 |
|---|---|
| Nearest PromoterID: | NM_178161 |
| Entrez ID: | 256297 |
| Nearest Unigene: | Hs.351503 |
| Nearest Refseq: | NM_178161 |
| Nearest Ensembl: | ENSG00000168267 |
| Gene Name: | PTF1A |
| Gene Alias: | PACA|PAGEN2|PTF1-p48|bHLHa29|p48 |
| Gene Description: | pancreas associated transcription factor 1a |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
