Difference between revisions of "TSS:Hg 232258.1"
From referenceTSS
| Line 14: | Line 14: | ||
|distance=46 | |distance=46 | ||
|distance_to_tss=388545 | |distance_to_tss=388545 | ||
| − | |end= | + | |end=35127378 |
|end_of_center_position=35127378 | |end_of_center_position=35127378 | ||
|entrez_id=56288 | |entrez_id=56288 | ||
| Line 33: | Line 33: | ||
|num_trans=29 | |num_trans=29 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=35127377 |
|start_of_center_position=35127377 | |start_of_center_position=35127377 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000489321.5 | |transcript_name=ENST00000489321.5 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232258.1 | |tss_id=hg_232258.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q03060 | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 08:33, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35127377 |
|---|---|
| End of the center position in the TSS region: | 35127378 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000489321.5 |
|---|---|
| Distance: | 46 |
| Num_trans: | 29 |
| All_trans: | ENST00000489321.5:46 ENST00000427847.6:79 ENST00000374728.7:79 NM_183060:79 ENST00000345491.7:82 BC041810:82 ENST00000487132.5:99 NM_181571:-151 ENST00000354759.7:-216 D14825:-216 ENST00000496019.5:-222 ENST00000460270.5:-261 ENST00000469949.6:-276 ENST00000429130.7:-287 ENST00000495960.5:-315 ENST00000482633.5:-330 NM_001267563:-377 NM_001267562:-377 NM_001352467:-377 NM_001352466:-377 NM_001352465:-377 NM_183013:-377 ENST00000466251.5:-389 BC017117:-401 ENST00000490460.5:-419 ENST00000461968.5:-430 ENST00000374726.7:-455 BC066342:-455 ENST00000489388.5:-472 |
TATA-Box annotation
| Distance to TSS: | 388545 |
|---|---|
| Nearest PromoterID: | NM_001184785 |
| Entrez ID: | 56288 |
| Nearest Unigene: | Hs.131489 |
| Nearest Refseq: | NM_019619 |
| Nearest Ensembl: | ENSG00000148498 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 |
| Gene Description: | par-3 family cell polarity regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
