Difference between revisions of "TSS:Hg 232265.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000622550.2:-32 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=-32 |
|distance_to_tss=-82 | |distance_to_tss=-82 | ||
| − | |end= | + | |end=38403223 |
|end_of_center_position=38403222 | |end_of_center_position=38403222 | ||
|entrez_id=91074 | |entrez_id=91074 | ||
| Line 12: | Line 12: | ||
|gene_description=ankyrin repeat domain 30A | |gene_description=ankyrin repeat domain 30A | ||
|gene_id=91074 | |gene_id=91074 | ||
| − | |gene_name= | + | |gene_name=ANKRD30A |
|gene_source=HGNC:17234 | |gene_source=HGNC:17234 | ||
|gene_symbol=ANKRD30A | |gene_symbol=ANKRD30A | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_052997 | |nearest_refseq=NM_052997 | ||
|nearest_unigene=Hs.373787 | |nearest_unigene=Hs.373787 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
| − | |start= | + | |start=38403220 |
|start_of_center_position=38403221 | |start_of_center_position=38403221 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000622550.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232265.1 | |tss_id=hg_232265.1 | ||
Latest revision as of 08:33, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 38403221 |
|---|---|
| End of the center position in the TSS region: | 38403222 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000622550.2 |
|---|---|
| Distance: | -32 |
| Num_trans: | 1 |
| All_trans: | ENST00000622550.2:-32 |
TATA-Box annotation
| Distance to TSS: | -82 |
|---|---|
| Nearest PromoterID: | NM_052997 |
| Entrez ID: | 91074 |
| Nearest Unigene: | Hs.373787 |
| Nearest Refseq: | NM_052997 |
| Nearest Ensembl: | ENSG00000148513 |
| Gene Name: | ANKRD30A |
| Gene Alias: | NY-BR-1 |
| Gene Description: | ankyrin repeat domain 30A |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
