Difference between revisions of "TSS:Hg 232270.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_014753:28 AK308420:321 ENST00000374518.5:323 uc001jaj.4:323 BC043345:333 |chr=chr10 |cpg_percent=0.095 |distance=28 |distance_to_tss=-28 |end=4278247...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |BMS1L= |
| + | |all_trans=LF354628:212 MA590205:212 LF330971:212 MA566548:212 LF319157:214 MA554734:214 CU677700:-278 CU678643:-278 CU674703:-278 LF211474:-364 MA447051:-364 LF330972:438 MA566549:438 LF354629:439 MA590206:439 LF319156:441 MA554733:441 LF319158:-485 MA554735:-485 LF330970:-487 MA566547:-487 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=212 |
| − | |distance_to_tss=- | + | |distance_to_tss=-317 |
| − | |end= | + | |end=43386932 |
| + | |end_of_center_position=43386924 | ||
|entrez_id=9790 | |entrez_id=9790 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=ACC | + | |gene_alias=ACC{{!}}BMS1L |
| − | |gene_description= | + | |gene_description=BMS1 ribosome biogenesis factor |
|gene_id=9790 | |gene_id=9790 | ||
| − | |gene_name= | + | |gene_name=BMS1 |
|gene_source=HGNC:23505 | |gene_source=HGNC:23505 | ||
|gene_symbol=BMS1 | |gene_symbol=BMS1 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_014753 | |nearest_refseq=NM_014753 | ||
|nearest_unigene=Hs.10848 | |nearest_unigene=Hs.10848 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
| − | |start= | + | |start=43386915 |
| + | |start_of_center_position=43386923 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF354628 MA590205 LF330971 MA566548 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232270.1 | |tss_id=hg_232270.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q14692 | |uniprot_id=Q14692 | ||
}} | }} | ||
Latest revision as of 08:33, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43386923 |
|---|---|
| End of the center position in the TSS region: | 43386924 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354628 MA590205 LF330971 MA566548 |
|---|---|
| Distance: | 212 |
| Num_trans: | 21 |
| All_trans: | LF354628:212 MA590205:212 LF330971:212 MA566548:212 LF319157:214 MA554734:214 CU677700:-278 CU678643:-278 CU674703:-278 LF211474:-364 MA447051:-364 LF330972:438 MA566549:438 LF354629:439 MA590206:439 LF319156:441 MA554733:441 LF319158:-485 MA554735:-485 LF330970:-487 MA566547:-487 |
TATA-Box annotation
| Distance to TSS: | -317 |
|---|---|
| Nearest PromoterID: | NM_014753 |
| Entrez ID: | 9790 |
| Nearest Unigene: | Hs.10848 |
| Nearest Refseq: | NM_014753 |
| Nearest Ensembl: | ENSG00000165733 |
| Gene Name: | BMS1 |
| Gene Alias: | ACC|BMS1L |
| Gene Description: | BMS1 ribosome biogenesis factor |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
