Personal tools

Difference between revisions of "TSS:Hg 232272.1"

From referenceTSS

Jump to: navigation, search
 
Line 13: Line 13:
 
|distance=NA
 
|distance=NA
 
|distance_to_tss=115
 
|distance_to_tss=115
|end=43104847
+
|end=43409160
 
|end_of_center_position=43409154
 
|end_of_center_position=43409154
 
|entrez_id=5979
 
|entrez_id=5979
Line 32: Line 32:
 
|num_trans=0
 
|num_trans=0
 
|species=human
 
|species=human
|start=43104846
+
|start=43409146
 
|start_of_center_position=43409153
 
|start_of_center_position=43409153
 
|strand=+
 
|strand=+

Latest revision as of 08:33, 14 July 2021

Basic information about the TSS


TSS ID:hg_232272.1
Species:human
Chr:chr10
TSS Classification:yes
Start:43409146
End:43409160
Strand:+
TSS Score:1
Start of the center position in the TSS region:43409153
End of the center position in the TSS region:43409154



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:5979
HGNC/MGI_ID:HGNC:9967
UniProt_ID:
Gene_name:RET
Gene_symbol:RET
Gene_synonyms:CDHF12 CDHR16 PTC RET51
Gene_source:HGNC:9967



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:AK294827:69 ENST00000479913.1:-115 uc057svy.1:-115



TATA-Box annotation


Distance to TSS:115
Nearest PromoterID:NM_001355216
Entrez ID:5979
Nearest Unigene:Hs.350321
Nearest Refseq:NM_000323
Nearest Ensembl:ENSG00000165731
Gene Name:RET
Gene Alias:CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1
Gene Description:ret proto-oncogene
Gene Type:protein-coding
CpG%:0.09
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):