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Difference between revisions of "TSS:Hg 232280.1"

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Line 8: Line 8:
 
|distance=407
 
|distance=407
 
|distance_to_tss=75
 
|distance_to_tss=75
|end=46109570
+
|end=46581764
 
|end_of_center_position=46581764
 
|end_of_center_position=46581764
 
|entrez_id=653268
 
|entrez_id=653268
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|num_trans=1
 
|num_trans=1
 
|species=human
 
|species=human
|start=46109569
+
|start=46581763
 
|start_of_center_position=46581763
 
|start_of_center_position=46581763
 
|strand=+
 
|strand=+

Revision as of 08:33, 14 July 2021

Basic information about the TSS


TSS ID:hg_232280.1
Species:human
Chr:chr10
TSS Classification:no
Start:46581763
End:46581764
Strand:+
TSS Score:1
Start of the center position in the TSS region:46581763
End of the center position in the TSS region:46581764



Gene and protein annotation


Transcript_name:ENST00000374328.3
Distance:407
GeneID:83849
HGNC/MGI_ID:HGNC:17167
UniProt_ID:H3BLX3
Gene_name:synaptotagmin 15
Gene_symbol:SYT15
Gene_synonyms:CHR10SYT
Gene_source:HGNC:17167



Transcript annotation


Transcript_name:ENST00000374328.3
Distance:407
Num_trans:1
All_trans:ENST00000374328.3:407



TATA-Box annotation


Distance to TSS:75
Nearest PromoterID:NR_126580
Entrez ID:653268
Nearest Unigene:Hs.447454
Nearest Refseq:NM_001077685
Nearest Ensembl:
Gene Name:synaptotagmin 15
Gene Alias:AGAP-7|AGAP7|CTGLF4|bA109G10.1
Gene Description:ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
Gene Type:pseudo
CpG%:0.055
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):