Difference between revisions of "TSS:Hg 232330.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance=22 | |distance=22 | ||
|distance_to_tss=10158 | |distance_to_tss=10158 | ||
| − | |end= | + | |end=6062331 |
|end_of_center_position=6062331 | |end_of_center_position=6062331 | ||
|entrez_id=220965 | |entrez_id=220965 | ||
| Line 24: | Line 24: | ||
|num_trans=14 | |num_trans=14 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=6062330 |
|start_of_center_position=6062330 | |start_of_center_position=6062330 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000379954.5 X01057 K03122 | |transcript_name=ENST00000379954.5 X01057 K03122 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232330.1 | |tss_id=hg_232330.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5W005 | |uniprot_id=Q5W005 | ||
}} | }} | ||
Revision as of 08:34, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6062330 |
|---|---|
| End of the center position in the TSS region: | 6062331 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379954.5 X01057 K03122 |
|---|---|
| Distance: | 22 |
| Num_trans: | 14 |
| All_trans: | ENST00000379954.5:22 X01057:22 K03122:22 ENST00000379959.8:-36 NM_001308243:-36 NM_001308242:-36 NM_000417:-36 AK313847:-36 ENST00000644262.1:-39 AK223313:39 ENST00000256876.10:41 BC156627:180 BC152889:180 AB528862:180 |
TATA-Box annotation
| Distance to TSS: | 10158 |
|---|---|
| Nearest PromoterID: | NM_198215 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
