Difference between revisions of "TSS:Hg 232338.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=45723 |
| − | |end= | + | |end=67764503 |
|end_of_center_position=67764500 | |end_of_center_position=67764500 | ||
|entrez_id=84159 | |entrez_id=84159 | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
| − | |gene_alias=DESRT | + | |gene_alias=DESRT{{!}}MRF-2{{!}}MRF2 |
|gene_description=AT-rich interaction domain 5B | |gene_description=AT-rich interaction domain 5B | ||
|gene_id=84159 | |gene_id=84159 | ||
| − | |gene_name= | + | |gene_name=ARID5B |
|gene_source=HGNC:17362 | |gene_source=HGNC:17362 | ||
|gene_symbol=ARID5B | |gene_symbol=ARID5B | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_032199 | |nearest_refseq=NM_032199 | ||
|nearest_unigene=Hs.535297 | |nearest_unigene=Hs.535297 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=67764496 |
|start_of_center_position=67764499 | |start_of_center_position=67764499 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232338.1 | |tss_id=hg_232338.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 08:35, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 67764499 |
|---|---|
| End of the center position in the TSS region: | 67764500 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BC017404:166 |
TATA-Box annotation
| Distance to TSS: | 45723 |
|---|---|
| Nearest PromoterID: | NM_001244638 |
| Entrez ID: | 84159 |
| Nearest Unigene: | Hs.535297 |
| Nearest Refseq: | NM_032199 |
| Nearest Ensembl: | ENSG00000150347 |
| Gene Name: | ARID5B |
| Gene Alias: | DESRT|MRF-2|MRF2 |
| Gene Description: | AT-rich interaction domain 5B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
