Difference between revisions of "TSS:Hg 232358.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=-142 | |distance=-142 | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
| − | |end= | + | |end=71812025 |
|end_of_center_position=71812025 | |end_of_center_position=71812025 | ||
|entrez_id=84883 | |entrez_id=84883 | ||
| Line 25: | Line 25: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=71812024 |
|start_of_center_position=71812024 | |start_of_center_position=71812024 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=NM_001171936 NM_001171935 AY563161 AY563162 | |transcript_name=NM_001171936 NM_001171935 AY563161 AY563162 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232358.1 | |tss_id=hg_232358.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9H251 | |uniprot_id=Q9H251 | ||
}} | }} | ||
Revision as of 08:35, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71812024 |
|---|---|
| End of the center position in the TSS region: | 71812025 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001171936 NM_001171935 AY563161 AY563162 |
|---|---|
| Distance: | -142 |
| Num_trans: | 4 |
| All_trans: | NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_032797 |
| Entrez ID: | 84883 |
| Nearest Unigene: | Hs.650680 |
| Nearest Refseq: | NM_032797 |
| Nearest Ensembl: | ENSG00000042286 |
| Gene Name: | cadherin related 23 |
| Gene Alias: | AMID|PRG3 |
| Gene Description: | apoptosis inducing factor mitochondria associated 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
