Difference between revisions of "TSS:Hg 232398.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=-21159 | |distance_to_tss=-21159 | ||
| − | |end= | + | |end=78033890 |
|end_of_center_position=78033889 | |end_of_center_position=78033889 | ||
|entrez_id=80760 | |entrez_id=80760 | ||
| Line 25: | Line 25: | ||
|num_trans=32 | |num_trans=32 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=78033886 |
|start_of_center_position=78033888 | |start_of_center_position=78033888 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC003149 | |transcript_name=BC003149 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232398.1 | |tss_id=hg_232398.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:36, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78033888 |
|---|---|
| End of the center position in the TSS region: | 78033889 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC003149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | BC003149:0 ENST00000466129.6:-1 ENST00000465692.2:1 BC000523:-4 AF147330:-8 BC071926:-9 ENST00000476545.6:-10 ENST00000645698.1:-13 BX647260:-13 ENST00000475468.6:14 BX537975:-22 M31520:-22 ENST00000478655.6:-24 ENST00000485708.7:-24 ENST00000464716.6:-24 ENST00000360830.9:-24 ENST00000372360.9:-24 ENST00000440692.6:-24 NM_001142285:-24 NM_033022:-24 D28424:-24 AK311776:-24 AK311910:-24 ENST00000482069.5:27 ENST00000645440.1:-51 ENST00000435275.5:-127 ENST00000613865.5:-127 NM_001026:-127 NM_001142283:-127 NM_001142284:-127 NM_001142282:-127 ENST00000646254.1:320 |
TATA-Box annotation
| Distance to TSS: | -21159 |
|---|---|
| Nearest PromoterID: | NM_032817 |
| Entrez ID: | 80760 |
| Nearest Unigene: | Hs.498586 |
| Nearest Refseq: | NM_030569 |
| Nearest Ensembl: | ENSG00000123243 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | ITI-HC5|PP14776 |
| Gene Description: | inter-alpha-trypsin inhibitor heavy chain 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
